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  5. Azfi_s0050.g031135

Azfi_s0050.g031135 (SNP33, SNAP33,...)


Aliases : SNP33, SNAP33, ATSNAP33B, ATSNAP33

Description : Qbc-type SNAP25-group component of SNARE membrane fusion complex & original description: CDS=357-1679


Gene families : OG0002168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0050.g031135
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G61210 SNP33, SNAP33,... soluble N-ethylmaleimide-sensitive factor adaptor protein 33 0.03 OrthoFinder output from all 47 species
Dac_g22700 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os02g24080.4 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g32740.1 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Len_g11609 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Lfl_g19045 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
MA_10430155g0020 SNP33, SNAP33,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g09555 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!