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  5. Azfi_s0050.g031101

Azfi_s0050.g031101


Description : E2 ubiquitin-conjugating enzyme *(UBC4) & original description: CDS=372-614


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0050.g031101
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT2G46030 UBC6 ubiquitin-conjugating enzyme 6 0.03 OrthoFinder output from all 47 species
Adi_g108395 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47654.t1 UBC5, Aspi01Gene47654 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Cba_g37752 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Ore_g34777 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33764 UBC4, ATUBC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17892 No alias E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g012240.3.1 UBC5, Solyc10g012240 ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g09672 UBC4, ATUBC4 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.01 OrthoFinder output from all 47 species
Tin_g44381 UBC5 E2 ubiquiTin-conjugaTing enzyme *(UBC4) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!