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  5. Azfi_s0050.g030980

Azfi_s0050.g030980


Description : not classified & original description: CDS=1-2649


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0050.g030980

Target Alias Description ECC score Gene Family Method Actions
Adi_g015952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10587.t1 CRR2, Aspi01Gene10587 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000887 No alias not classified & original description: CDS=1-1611 0.06 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.04 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.02 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g05340 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
Len_g03325 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_139163g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23581 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04082 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 99
IPR002885 Pentatricopeptide_repeat 482 512
IPR002885 Pentatricopeptide_repeat 454 476
IPR002885 Pentatricopeptide_repeat 150 176
IPR002885 Pentatricopeptide_repeat 178 208
IPR002885 Pentatricopeptide_repeat 350 376
IPR002885 Pentatricopeptide_repeat 281 310
IPR002885 Pentatricopeptide_repeat 783 807
IPR002885 Pentatricopeptide_repeat 555 575
IPR002885 Pentatricopeptide_repeat 581 627
IPR002885 Pentatricopeptide_repeat 379 425
IPR002885 Pentatricopeptide_repeat 709 755
No external refs found!