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  5. Azfi_s0050.g030979

Azfi_s0050.g030979 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: CDS=1-2211


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0050.g030979

Target Alias Description ECC score Gene Family Method Actions
Als_g12676 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Cba_g13170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02798 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
LOC_Os05g42250.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06570.1 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os12g28260.1 CNGC7, ATCNGC7,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc03g116850.3.1 ATCNGC8, CNGC8,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Solyc06g051920.4.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 140 464
No external refs found!