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  5. Azfi_s0048.g030540

Azfi_s0048.g030540


Description : not classified & original description: CDS=1-432


Gene families : OG0006946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0048.g030540
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075230 evm_27.TU.AmTr_v1... Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G12930 No alias Lojap-related protein 0.03 OrthoFinder output from all 47 species
Aob_g08779 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g066460.3.1 Solyc07g066460 Protein Iojap, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034562_P001 Zm00001e034562 Protein Iojap, chloroplastic OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA

No InterPro domains available for this sequence

No external refs found!