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  5. Azfi_s0042.g026852

Azfi_s0042.g026852 (HIRA)


Aliases : HIRA

Description : component *(HIRA) of HIRA chaperone complex & original description: CDS=662-3595


Gene families : OG0003681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0042.g026852

Target Alias Description ECC score Gene Family Method Actions
AT3G44530 HIRA homolog of histone chaperone HIRA 0.02 OrthoFinder output from all 47 species
Aop_g11886 HIRA component *(HIRA) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.30 HIRA Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Zm00001e016618_P001 HIRA, Zm00001e016618 histone chaperone (HIRA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 13 41
IPR001680 WD40_repeat 117 154
IPR001680 WD40_repeat 341 370
IPR001680 WD40_repeat 160 195
IPR001680 WD40_repeat 58 93
IPR011494 Hira 702 902
No external refs found!