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  5. Azfi_s0040.g026506

Azfi_s0040.g026506


Description : plastidial RNA processing factor *(PPR287) & original description: CDS=92-1939


Gene families : OG0007004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0040.g026506

Target Alias Description ECC score Gene Family Method Actions
Mp1g28660.1 No alias ndhA-specific mRNA splicing factor. plastidial RNA... 0.02 OrthoFinder output from all 47 species
Spa_g07815 No alias plastidial RNA processing factor *(PPR287) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 259 285
IPR002885 Pentatricopeptide_repeat 422 479
IPR002885 Pentatricopeptide_repeat 293 338
IPR002885 Pentatricopeptide_repeat 501 549
IPR002885 Pentatricopeptide_repeat 360 408
IPR002885 Pentatricopeptide_repeat 185 232
No external refs found!