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  5. Azfi_s0038.g026160

Azfi_s0038.g026160 (ATGLR3.1, GLR2, GLR3.1, ATGLR2)


Aliases : ATGLR3.1, GLR2, GLR3.1, ATGLR2

Description : ligand-gated cation channel *(GLR) & original description: CDS=252-1631


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0038.g026160
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT2G29100 ATGLR2.9, GLR2.9 glutamate receptor 2.9 0.03 OrthoFinder output from all 47 species
AT4G35290 ATGLR3.2,... glutamate receptor 2 0.04 OrthoFinder output from all 47 species
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.03 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.02 OrthoFinder output from all 47 species
Als_g58181 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
MA_3635444g0010 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Nbi_g29585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c15_25650V3.1 GLR3.3,... glutamate receptor 3.3 0.01 OrthoFinder output from all 47 species
Sam_g51319 No alias ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g077290.2.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Solyc08g006500.4.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 65 388
IPR001320 Iontro_rcpt_C 389 414
No external refs found!