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  5. Azfi_s0034.g025285

Azfi_s0034.g025285


Description : scaffold nucleoporin of nuclear pore complex *(NUP75/85) & original description: CDS=142-2175


Gene families : OG0004258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0034.g025285
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Ala_g02003 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Ceric.05G088400.1 Ceric.05G088400 scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
GSVIVT01035621001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Nbi_g36579 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Sam_g52336 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Solyc08g066580.4.1 Solyc08g066580 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Tin_g06661 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011502 Nucleoporin_Nup85 85 368
IPR011502 Nucleoporin_Nup85 370 638
No external refs found!