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  5. Azfi_s0032.g024872

Azfi_s0032.g024872 (GTE6)


Aliases : GTE6

Description : transcriptional co-activator *(BET/GTE) & original description: CDS=148-1347


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0032.g024872
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00204230 NPX1,... Transcription factor GTE10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G63320 NPX1 nuclear protein X1 0.02 OrthoFinder output from all 47 species
Aop_g05045 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06213 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27575 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G079700.1 GTE8, Ceric.01G079700 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G016200.1 BET9, ATBET9,... transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g367300 BET9, ATBET9 Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g08190 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020670001 GTE4 Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034328001 GTE1, GTE01, IMB1 Transcription factor GTE1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_30202 GTE8 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
LOC_Os02g15220.2 GTE4, LOC_Os02g15220 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
LOC_Os02g38980.1 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
LOC_Os06g04640.1 GTE1, GTE01,... transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Len_g17766 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Len_g40392 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Len_g40831 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
MA_10435152g0020 GTE8 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
MA_87057g0010 GTE4 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Mp1g20280.1 GTE4 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Ore_g29656 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ore_g30636 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Pir_g36932 NPX1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sam_g12553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12555 No alias transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
Sam_g14422 No alias transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Smo28941 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g008070.4.1 GTE4, Solyc10g008070 Transcription factor GTE4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g18573 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e029260_P001 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR027353 NET_dom 364 425
IPR001487 Bromodomain 200 287
No external refs found!