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  5. Azfi_s0027.g023658

Azfi_s0027.g023658


Description : not classified & original description: CDS=239-1612


Gene families : OG0002117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0027.g023658
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cba_g01881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G068600.1 Ceric.37G068600 not classified & original description: pacid=50615867... 0.06 OrthoFinder output from all 47 species
Cre06.g294550 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os06g01790.1 LOC_Os06g01790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g10510.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021806 No alias not classified & original description: CDS=299-1663 0.03 OrthoFinder output from all 47 species
Sam_g38434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g060510.4.1 Solyc03g060510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
InterPro domains Description Start Stop
IPR008537 DUF819 90 451
No external refs found!