Azfi_s0027.g023510 (ATSCO1/CPEF-G, SCO1, ATSCO1)

Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : translation elongation factor *(EF-G) & original description: CDS=203-2539

Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0027.g023510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00149p00031690	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AT1G62750	ATSCO1/CPEF-G,...	Translation elongation factor EFG/EF2 protein	0.08	OrthoFinder output from all 47 species
Adi_g024951	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Adi_g087916	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Aev_g08240	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Ala_g02375	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Als_g15105	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Aob_g05315	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Aop_g06164	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene31691.t1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Cba_g01251	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Ceric.04G106300.1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.55	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.56	No alias	Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cre02.g076250	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
Dac_g00996	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g08930	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.08	OrthoFinder output from all 47 species
Ehy_g01583	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.1	OrthoFinder output from all 47 species
Gb_36066	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.06	OrthoFinder output from all 47 species
LOC_Os04g45490.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.04	OrthoFinder output from all 47 species
Len_g12465	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Len_g18043	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Lfl_g02343	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Mp7g06620.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.06	OrthoFinder output from all 47 species
Nbi_g06861	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Ore_g06596	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g07398	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g15053	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Spa_g05896	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Spa_g28181	ATSCO1/CPEF-G,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01189	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.08	OrthoFinder output from all 47 species
Zm00001e041325_P001	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
MF	GO:0098809	nitrite reductase activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	404	471
IPR000795	T_Tr_GTP-bd_dom	89	361
IPR000640	EFG_V-like	681	767
IPR041095	EFG_II	484	557
IPR005517	Transl_elong_EFG/EF2_IV	559	677

External Links

No external refs found!

Azfi_s0027.g023510 (ATSCO1/CPEF-G, SCO1, ATSCO1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation