Azfi_s0024.g020323

Description : not classified & original description: CDS=58-3480

Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0024.g020323
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00115360	evm_27.TU.AmTr_v1...	DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT5G04895	No alias	DEA(D/H)-box RNA helicase family protein	0.02	OrthoFinder output from all 47 species
Aev_g21216	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G077000.1	Ceric.20G077000	not classified & original description: pacid=50565979...	0.03	OrthoFinder output from all 47 species
Cre06.g266416	No alias	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic...	0.02	OrthoFinder output from all 47 species
Len_g47532	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26916	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004608_P001	Zm00001e004608	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	702	774
IPR011545	DEAD/DEAH_box_helicase_dom	254	401
IPR014720	dsRBD_dom	1034	1095
IPR001650	Helicase_C	508	638
IPR011709	DEAD-box_helicase_OB_fold	858	940

External Links

No external refs found!