1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0021.g015647

Azfi_s0021.g015647 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: CDS=322-1731


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0021.g015647

Target Alias Description ECC score Gene Family Method Actions
AT5G27945 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Gb_04004 CDC20.2 Cell division cycle 20.2, cofactor of APC complex... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51110.1 CDC20.1, LOC_Os04g51110 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.03 OrthoFinder output from all 47 species
Pir_g11271 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Smo139237 CDC20.1 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
Spa_g05236 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005539 glycosaminoglycan binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042834 peptidoglycan binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 179 234
IPR001680 WD40_repeat 263 295
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 396 430
No external refs found!