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  5. Azfi_s0020.g015475

Azfi_s0020.g015475


Description : component *(CWC21) of MAC spliceosome-associated complex & original description: CDS=182-3205


Gene families : OG0003203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0020.g015475
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT3G23900 No alias RNA recognition motif (RRM)-containing protein 0.05 OrthoFinder output from all 47 species
Als_g03832 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56052.t2 Aspi01Gene56052 component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Cba_g27324 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Dcu_g46607 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.07 OrthoFinder output from all 47 species
GSVIVT01001478001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g32499 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Lfl_g04122 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Pir_g15377 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Pnu_g10132 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Pnu_g13094 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Solyc09g092250.3.1 Solyc09g092250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e025611_P001 Zm00001e025611 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 379 439
IPR017868 Filamin/ABP280_repeat-like 95 196
No external refs found!