Azfi_s0020.g015470 (ATTRN1, TRN1)

Aliases : ATTRN1, TRN1

Description : nucleocytoplasmic import karyopherin *(IMB2) & original description: CDS=229-2904

Gene families : OG0002901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002901_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0020.g015470
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00180430	ATTRN1, TRN1,...	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Aev_g14892	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.02	OrthoFinder output from all 47 species
Aev_g18204	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.04	OrthoFinder output from all 47 species
Ala_g14445	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.04	OrthoFinder output from all 47 species
Als_g23852	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.03	OrthoFinder output from all 47 species
Aob_g04499	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.03	OrthoFinder output from all 47 species
Dde_g10872	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.04	OrthoFinder output from all 47 species
Mp7g05740.1	ATTRN1, TRN1	IMB2 nucleocytoplasmic import karyopherin	0.03	OrthoFinder output from all 47 species
Sam_g08978	No alias	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.03	OrthoFinder output from all 47 species
Solyc01g111780.4.1	ATTRN1, TRN1,...	IMB2 nucleocytoplasmic import karyopherin	0.05	OrthoFinder output from all 47 species
Spa_g17856	ATTRN1, TRN1	nucleocytoplasmic import karyopherin *(IMB2) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005049	nuclear export signal receptor activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000357	HEAT	667	695
IPR001494	Importin-beta_N	36	102

External Links

No external refs found!

Azfi_s0020.g015470 (ATTRN1, TRN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation