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  5. Ehy_g02963

Ehy_g02963 (NUP155)


Aliases : NUP155

Description : scaffold nucleoporin of nuclear pore complex *(NUP155) & original description: none


Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g02963

Target Alias Description ECC score Gene Family Method Actions
Adi_g057726 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Aop_g13988 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Cba_g03417 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Ceric.28G038900.1 NUP155, Ceric.28G038900 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011662001 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Lfl_g02470 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.04 OrthoFinder output from all 47 species
MA_169470g0010 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Msp_g14719 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Ore_g37203 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.04 OrthoFinder output from all 47 species
Pnu_g19403 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Solyc07g008160.3.1 NUP155, Solyc07g008160 NUP155 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Tin_g01295 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Zm00001e000883_P002 NUP155, Zm00001e000883 NUP155 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007187 Nucleoporin_Nup133/Nup155_C 830 1289
IPR014908 Nucleoporin_Nup133/Nup155_N 54 492
No external refs found!