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  5. Azfi_s0017.g014511

Azfi_s0017.g014511


Description : not classified & original description: CDS=1-3180


Gene families : OG0004459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0017.g014511
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Adi_g084143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G067000.1 Ceric.29G067000 not classified & original description: pacid=50625433... 0.03 OrthoFinder output from all 47 species
Dac_g32468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g04520.2 LOC_Os03g04520 Splicing factor U2af large subunit B OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Lfl_g38674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g090420.4.1 Solyc09g090420 Splicing factor U2af large subunit B OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e038951_P001 Zm00001e038951 Splicing factor U2af large subunit A OS=Nicotiana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!