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  5. Azfi_s0012.g012927

Azfi_s0012.g012927 (PLPB, PLPA, PLPC, PLP)


Aliases : PLPB, PLPA, PLPC, PLP

Description : UV-A/blue light photoreceptor *(PLP) & original description: CDS=587-1888


Gene families : OG0002747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0012.g012927
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Aob_g02173 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03233 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21360 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11026 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25298 No alias UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo443359 PLPB, PLPA, PLPC, PLP External stimuli response.light.UV-A/blue... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 82 173
IPR000014 PAS 286 388
No external refs found!