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  5. Azfi_s0012.g012868

Azfi_s0012.g012868 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : component *(MSI1) of PRC2 histone methylation complex & original description: CDS=335-1606


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0012.g012868

Target Alias Description ECC score Gene Family Method Actions
Cre12.g523200 MSI1, MEE70, ATMSI1 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Zm00001e005036_P003 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex.... 0.04 OrthoFinder output from all 47 species
Zm00001e035979_P001 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP HCCA
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006481 C-terminal protein methylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0018410 C-terminal protein amino acid modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 19 88
IPR001680 WD40_repeat 224 257
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 264 302
No external refs found!