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  5. Azfi_s0010.g012423

Azfi_s0010.g012423


Description : not classified & original description: CDS=62-2707


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0010.g012423

Target Alias Description ECC score Gene Family Method Actions
Cba_g67864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G052300.1 Ceric.17G052300 not classified & original description: pacid=50618191... 0.05 OrthoFinder output from all 47 species
Lfl_g05716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17490 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 596 622
IPR002885 Pentatricopeptide_repeat 798 822
IPR002885 Pentatricopeptide_repeat 261 288
IPR002885 Pentatricopeptide_repeat 625 653
IPR002885 Pentatricopeptide_repeat 233 254
IPR002885 Pentatricopeptide_repeat 400 447
IPR002885 Pentatricopeptide_repeat 723 766
IPR002885 Pentatricopeptide_repeat 511 557
IPR002885 Pentatricopeptide_repeat 158 204
No external refs found!