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  5. Azfi_s0010.g012372

Azfi_s0010.g012372


Description : component *(SOP1) of PAXT RNA-exosome-activation complex & original description: CDS=1-6072


Gene families : OG0004256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0010.g012372

Target Alias Description ECC score Gene Family Method Actions
Ehy_g07964 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.02 OrthoFinder output from all 47 species
Gb_37874 No alias RNA degradation surveillance factor (SOP1) 0.04 OrthoFinder output from all 47 species
Lfl_g16590 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.04 OrthoFinder output from all 47 species
Pir_g15166 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.03 OrthoFinder output from all 47 species
Ppi_g15340 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!