Azfi_s0010.g012362

Description : not classified & original description: CDS=1-2418

Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0010.g012362
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
Ceric.11G019200.1	Ceric.11G019200	not classified & original description: pacid=50596467...	0.05	OrthoFinder output from all 47 species
Ceric.32G031800.1	Ceric.32G031800	not classified & original description: pacid=50597829...	0.05	OrthoFinder output from all 47 species
Nbi_g13837	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	75	121
IPR002885	Pentatricopeptide_repeat	189	235
IPR002885	Pentatricopeptide_repeat	423	469
IPR002885	Pentatricopeptide_repeat	649	696
IPR002885	Pentatricopeptide_repeat	304	354
IPR002885	Pentatricopeptide_repeat	622	646
IPR002885	Pentatricopeptide_repeat	538	566
IPR002885	Pentatricopeptide_repeat	163	187
IPR002885	Pentatricopeptide_repeat	278	303
IPR002885	Pentatricopeptide_repeat	47	73
IPR002885	Pentatricopeptide_repeat	771	797

External Links

No external refs found!