Aliases : VEL1, VIL2
Description : PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex & original description: CDS=270-2735
Gene families : OG0001143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001143_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g19530 | VEL1, VIL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g19531 | VEL1, VIL2 | PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38075 | VEL1, VIL2 | PRC2-VRN-interacting PHD protein (VIN3|VRN5) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os05g05310.2 | VIL1, VRN5,... | PRC2-VRN-interacting PHD protein (VIN3|VRN5) | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g02323 | VEL1, VIL2 | PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039731_P002 | VIL1, VRN5,... | PRC2-VRN-interacting PHD protein (VIN3|VRN5) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006665 | sphingolipid metabolic process | IEP | HCCA |
BP | GO:0006672 | ceramide metabolic process | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
CC | GO:0070939 | Dsl1/NZR complex | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032881 | Oberon_PHD | 167 | 288 |
No external refs found! |