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  5. Azfi_s0010.g012287

Azfi_s0010.g012287 (AT-RSH2, ATRSH2, RSH2)


Aliases : AT-RSH2, ATRSH2, RSH2

Description : bifunctional ppGpp synthetase and hydrolase *(RSH) & original description: CDS=1-2211


Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0010.g012287
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Adi_g013117 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000382.18 RSH3, AT-RSH3, ATRSH3 Probable GTP diphosphokinase RSH3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.31 RSH3, AT-RSH3, ATRSH3 Probable GTP diphosphokinase RSH3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g02876 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Dcu_g03138 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Dde_g11283 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Ehy_g06085 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Mp6g06980.1 AT-RSH2, ATRSH2, RSH2 Probable GTP diphosphokinase RSH2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007652 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024376 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Solyc03g123370.3.1 AT-RSH2, ATRSH2,... Probable GTP diphosphokinase RSH3, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 445 554
No external refs found!