Azfi_s0006.g010474 (SEB1, COBL7, ATSEB1)

Aliases : SEB1, COBL7, ATSEB1

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: CDS=452-2371

Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0006.g010474
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
Aev_g02340	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Aspi01Gene68529.t1	COBL2, Aspi01Gene68529	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Mp7g06600.1	COBL1	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc02g065765.1.1	COB, Solyc02g065765	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Zm00001e001386_P001	SEB1, COBL7,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	221	401

External Links

No external refs found!