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  5. Azfi_s0006.g010210

Azfi_s0006.g010210


Description : component *(BRAT1) of anti-silencing regulator complex & original description: CDS=447-4151


Gene families : OG0001881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010210
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00084950 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein At1g05910... 0.04 OrthoFinder output from all 47 species
AT1G05910 No alias cell division cycle protein 48-related / CDC48-related 0.04 OrthoFinder output from all 47 species
AT3G15120 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g060029 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.04 OrthoFinder output from all 47 species
Aev_g10813 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Aev_g11042 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species
Ceric.34G067200.1 Ceric.34G067200 component *(BRAT1) of anti-silencing regulator complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01010750001 No alias ATPase family AAA domain-containing protein At1g05910... 0.05 OrthoFinder output from all 47 species
GSVIVT01014274001 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.04 OrthoFinder output from all 47 species
Gb_05160 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 OrthoFinder output from all 47 species
Gb_11471 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 OrthoFinder output from all 47 species
Len_g11424 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
Lfl_g04260 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g18945 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
MA_10425878g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432357g0010 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 OrthoFinder output from all 47 species
Ore_g33221 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Smo170139 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 OrthoFinder output from all 47 species
Solyc07g062770.2.1 Solyc07g062770 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.04 OrthoFinder output from all 47 species
Spa_g08442 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Tin_g01284 No alias component *(BRAT1) of anti-silencing regulator complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 883 955
IPR041569 AAA_lid_3 548 584
IPR003959 ATPase_AAA_core 386 520
No external refs found!