- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CHMP1A, VPS46.2
Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: CDS=1-624
Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0006.g009683 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g38525 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04988 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35007 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G020900.1 | CHMP1A, VPS46.2,... | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020554.72 | CHMP1B, VPS46.1 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g46536 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.01 | OrthoFinder output from all 47 species | |
| Mp5g17770.1 | CHMP1B, VPS46.1 | VPS46/CHMP1 associated protein of ESCRT-III complex | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g47406 | No alias | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08488 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08489 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03806 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0018580 | nitronate monooxygenase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 15 | 176 |
| No external refs found! |