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  5. Azfi_s0005.g009061

Azfi_s0005.g009061 (PHR1, AtPHR1)


Aliases : PHR1, AtPHR1

Description : GARP subgroup PHL transcription factor & original description: CDS=394-1968


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type
Type Description Actions
Neighborhood HRR: Azfi_s0005.g009061
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00049490 evm_27.TU.AmTr_v1... Nutrient uptake.phosphorus assimilation.phosphate... 0.04 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11638 No alias transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16380 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g24159 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g27590 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74466 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g14665 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g01255 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g05367 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26301 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g04161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09902 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11923 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31777 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002208 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.06 OrthoFinder output from all 47 species
Sam_g14784 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g40619 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g051060.4.1 Solyc06g051060 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Solyc09g072830.4.1 PHL1, Solyc09g072830 PHR1 transcription factor involved in proline synthesis... 0.06 OrthoFinder output from all 47 species
Solyc11g022470.2.1 Solyc11g022470 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000237_P002 Zm00001e000237 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 420 465
IPR001005 SANT/Myb 340 390
No external refs found!