Heatmap: Cluster_73 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.71 -1.04 -1.38 -1.94 -1.57 0.46 0.41 0.41 0.54 0.55 0.7 0.59 -0.24
-0.63 -0.76 -0.81 -1.61 -0.41 0.47 0.04 -0.43 0.55 0.78 0.5 0.68 -0.38
-0.21 0.03 -0.68 -0.82 -0.53 0.07 0.16 0.06 0.47 0.48 0.57 0.62 -2.22
-0.73 -0.45 -0.46 0.03 -0.59 0.43 -0.01 0.02 0.46 0.31 0.38 0.35 -0.49
-0.94 0.03 - - - 0.8 0.1 -0.45 0.33 1.16 1.02 1.08 -1.85
-0.83 -0.92 -1.86 -1.97 -1.79 0.91 0.42 0.24 0.92 0.63 0.58 0.44 -1.35
-1.21 -2.4 -2.03 -2.09 -1.34 0.02 0.67 0.35 0.44 0.89 0.87 1.05 -0.97
-0.33 -0.35 -0.45 -0.38 -0.38 0.33 0.21 0.02 0.47 0.28 0.22 0.35 -0.56
-0.98 -1.75 -1.55 -2.62 - -0.02 0.3 0.63 0.69 0.61 0.98 0.82 0.07
-0.42 -1.58 -0.16 -0.05 -0.66 0.41 0.35 0.21 0.34 0.45 0.68 0.51 -
-0.84 -0.23 - - - 0.26 0.16 0.18 0.44 1.23 0.92 1.05 -1.1
-0.64 -4.28 -1.89 -1.52 -1.5 0.39 0.72 0.58 0.44 0.84 0.78 0.74 -1.53
-0.53 -0.34 -0.96 -0.57 -0.22 0.07 0.21 0.34 0.1 0.73 0.58 0.61 -1.99
-1.41 -0.66 - - - 0.86 0.65 0.01 -0.83 1.15 1.33 1.03 -1.95
-0.26 -0.24 -0.57 -0.5 -0.01 0.34 0.1 0.16 0.31 0.3 0.31 0.25 -0.74
-0.68 -0.51 -0.51 -0.31 -0.08 0.46 0.21 0.19 0.4 0.28 0.33 0.38 -1.13
-0.58 -0.33 -0.72 -0.5 -0.24 0.3 0.22 0.14 0.41 0.31 0.32 0.55 -0.73
-0.6 -0.34 -1.13 -2.05 -1.3 0.14 -0.03 -0.29 0.59 0.88 1.05 0.91 -2.0
-0.66 -0.22 -1.73 -1.79 -0.95 0.51 -0.35 -0.64 0.41 0.85 1.1 1.04 -2.15
-0.39 -0.43 -0.7 0.08 -0.15 0.07 0.23 0.29 -0.09 0.46 0.47 0.5 -1.47
-0.01 0.27 -0.26 -0.1 -0.44 0.22 0.31 0.22 0.13 0.05 0.13 0.01 -0.99
-1.18 -0.11 -1.6 -1.44 -1.34 0.54 0.26 -0.15 0.65 0.62 0.7 0.74 -0.75
-0.19 -0.12 -0.47 -0.77 -0.06 0.16 0.35 0.32 0.71 0.18 -0.16 0.25 -1.18
-0.32 -0.56 -0.98 -1.32 -0.82 -0.15 -0.13 -0.23 0.13 0.98 0.97 0.88 -0.94
-0.59 -0.61 -1.18 -1.89 -1.25 0.09 0.48 0.43 0.47 0.51 0.66 0.73 -0.54
-0.38 -0.01 -0.82 -0.94 -0.35 0.17 -0.24 -0.31 0.14 0.62 0.56 0.62 -0.08
-0.18 -0.0 -0.75 -0.78 -0.05 0.1 0.35 0.29 0.53 0.3 0.07 0.2 -0.91
-0.69 0.18 -1.93 -2.03 -1.2 0.5 0.22 0.2 0.53 0.54 0.78 0.59 -1.11
-0.03 0.17 -0.26 -0.3 -0.35 0.45 0.35 0.26 0.42 -0.19 -0.0 -0.1 -1.07
-0.11 -0.1 -0.57 -0.55 -0.58 -0.13 -0.16 -0.43 0.11 0.62 0.7 0.89 -1.12
-0.74 -0.33 -2.78 -2.42 -2.94 0.2 0.39 0.44 0.78 0.64 0.68 0.74 -0.37
-0.37 -1.21 -4.48 - - 0.63 0.32 0.61 0.58 0.73 0.73 0.73 -0.07
-0.65 -0.27 -1.99 -1.74 -0.77 0.29 0.33 0.34 0.35 0.76 0.65 1.0 -3.06
-0.51 -0.74 -0.15 0.28 0.24 0.15 0.09 0.17 -0.09 0.4 0.3 0.32 -1.48
-0.01 0.09 -1.01 -1.05 -0.69 0.4 0.02 -0.08 0.28 0.54 0.57 0.6 -1.32
-0.52 -0.69 -0.37 -0.76 -0.52 0.53 0.2 -0.27 0.55 0.43 0.59 0.43 -0.91
-0.65 -0.34 -1.67 -1.67 -1.01 0.29 0.31 0.25 0.42 0.69 0.64 0.71 -0.65
-0.74 -0.09 -1.37 -0.85 -0.6 0.37 0.13 -0.79 0.25 0.81 0.51 0.66 -0.07
-0.5 -1.04 - - - -0.04 0.58 0.98 -0.03 0.93 0.93 1.07 -1.05
-0.53 -0.34 -0.55 -0.71 -0.46 0.12 -0.11 -0.48 0.2 0.74 0.79 0.82 -1.15
-2.01 -1.07 - - -6.5 0.22 -0.05 -1.96 1.42 1.03 1.3 1.31 -2.21
-0.42 -0.28 -0.4 -0.63 -0.04 0.34 0.01 -0.0 0.28 0.28 0.31 0.31 -0.21
-0.38 -0.25 -0.42 -0.7 -0.34 0.51 0.31 0.06 -0.17 0.58 0.71 0.58 -6.4
-0.65 -0.66 -1.5 -1.86 -1.76 0.52 0.32 0.3 0.75 0.47 0.58 0.45 -0.05
-0.5 -3.49 -1.92 -0.8 -1.07 -0.41 0.72 0.67 0.72 0.74 0.98 0.52 -2.57
-0.11 -0.88 -1.08 -1.09 -0.54 0.03 -0.19 -0.15 0.3 0.84 0.84 0.94 -1.43
-0.41 -0.71 -1.36 -1.08 -0.95 0.49 0.38 0.4 0.53 0.66 0.63 0.65 -3.72
-0.43 -0.32 -3.1 -2.69 -2.12 0.22 0.21 0.25 0.15 0.95 0.9 0.86 -0.48
-0.8 -1.37 -0.75 -1.03 -1.06 0.58 0.47 0.43 0.22 0.58 0.76 0.72 -2.03
-0.39 -0.25 -1.55 -2.39 -1.9 0.12 0.48 0.58 -0.01 0.82 0.89 0.91 -2.92
-1.76 -2.93 - -5.25 - 0.52 0.55 0.68 1.04 0.76 0.95 0.95 -1.2
-1.61 - -4.08 -3.97 -4.52 0.38 0.2 0.93 0.83 1.24 1.33 0.58 -15.93

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.