MA_10393806g0010


Description : Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica (sp|q10q08|rfa1b_orysj : 161.0)


Gene families : OG_01_0002905 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002905_tree ,
OG_02_0005884 (LandPlants) Phylogenetic Tree(s): OG_02_0005884_tree ,
OG_03_0006620 (SeedPlants) Phylogenetic Tree(s): OG_03_0006620_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10393806g0010
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 Archaeplastida
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.04 Archaeplastida
Cre16.g651000 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 Archaeplastida
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 Archaeplastida
GSVIVT01037062001 No alias Replication protein A 70 kDa DNA-binding subunit D... 0.03 Archaeplastida
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.04 Archaeplastida
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 Archaeplastida
MA_10327014g0020 No alias component RPA1 of RPA presynaptic filament assembly... 0.04 Archaeplastida
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 Archaeplastida
MA_177350g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 Archaeplastida
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.03 Archaeplastida
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.03 Archaeplastida
Zm00001e000841_P002 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 Archaeplastida
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 LandPlants
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.03 LandPlants
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 LandPlants
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 LandPlants
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 SeedPlants
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.03 SeedPlants
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 SeedPlants
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 SeedPlants
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
Zm00001e038720_P001 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031657 REPA_OB_2 9 53
IPR013955 Rep_factor-A_C 117 172
No external refs found!