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  5. MA_10393806g0010

MA_10393806g0010


Description : Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica (sp|q10q08|rfa1b_orysj : 161.0)


Gene families : OG_01_0002905 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002905_tree ,
OG_02_0005884 (LandPlants) Phylogenetic Tree(s): OG_02_0005884_tree ,
OG_03_0006620 (SeedPlants) Phylogenetic Tree(s): OG_03_0006620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10393806g0010
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 Archaeplastida
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.04 Archaeplastida
Cre16.g651000 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 Archaeplastida
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 Archaeplastida
GSVIVT01037062001 No alias Replication protein A 70 kDa DNA-binding subunit D... 0.03 Archaeplastida
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.04 Archaeplastida
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 Archaeplastida
MA_10327014g0020 No alias component RPA1 of RPA presynaptic filament assembly... 0.04 Archaeplastida
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 Archaeplastida
MA_177350g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 Archaeplastida
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.03 Archaeplastida
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.03 Archaeplastida
Zm00001e000841_P002 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 Archaeplastida
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 LandPlants
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.03 LandPlants
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 LandPlants
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 LandPlants
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 LandPlants
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 SeedPlants
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.03 SeedPlants
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 SeedPlants
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.03 SeedPlants
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants
Zm00001e038720_P001 No alias component RPA1 of single-stranded-DNA binding RPA... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR031657 REPA_OB_2 9 53
IPR013955 Rep_factor-A_C 117 172
No external refs found!