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  5. Azfi_s0003.g007710

Azfi_s0003.g007710 (AGL6)


Aliases : AGL6

Description : MADS/AGL-type transcription factor & original description: CDS=171-1355


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007710
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00254030 SHP2, AGL5,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.05 OrthoFinder output from all 47 species
AT2G22630 AGL17 AGAMOUS-like 17 0.05 OrthoFinder output from all 47 species
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT2G45650 AGL6 AGAMOUS-like 6 0.06 OrthoFinder output from all 47 species
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.05 OrthoFinder output from all 47 species
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G11880 AGL14 AGAMOUS-like 14 0.06 OrthoFinder output from all 47 species
AT4G24540 AGL24 AGAMOUS-like 24 0.04 OrthoFinder output from all 47 species
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g045544 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46452 AGL104 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05911 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28240 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33966 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15812.t2 AGL13, Aspi01Gene15812 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17819.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17826.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44552.t1 AGL13, Aspi01Gene44552 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49755.t1 Aspi01Gene49755 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53310.t1 AGL16, Aspi01Gene53310 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54037.t3 Aspi01Gene54037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68020.t1 AGL6, Aspi01Gene68020 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011751 No alias MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0684.g082058 AGL21 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.12G052200.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G001800.1 AGL104, Ceric.39G001800 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11287 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34128 AGL21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48421 AGL21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05429 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07325 AGL8, FUL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12956 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21427 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32401 AGL10, CAL1, CAL not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006592001 AGL61, DIA RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01008560001 SOC1, AGL20, ATSOC1 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01009171001 SVP, AGL22 RNA biosynthesis.transcriptional activation.MADS box... 0.07 OrthoFinder output from all 47 species
GSVIVT01012110001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01019883001 GL19, AGL19 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01026207001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01033253001 AGL15 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01038474001 AGL16 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
Gb_03806 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_03807 AGL16 transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Gb_16301 STK, AGL11 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Gb_19897 AGL16 MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
LOC_Os02g07430.1 AGL32, TT16,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08754.1 SVP, AGL22,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
LOC_Os03g54160.1 AGL7, AP1, LOC_Os03g54160 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g23950.1 LOC_Os06g23950 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
LOC_Os06g23980.1 AGL16, LOC_Os06g23980 MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g10506 AGL6 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44573 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16827 AGL21 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37644 AGL21 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432817g0010 SVP, AGL22 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
MA_2986g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_333471g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_347547g0010 SOC1, AGL20, ATSOC1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5917g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_6279308g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
MA_8748850g0010 AGL24 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_9841429g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Msp_g06990 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05686 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21770 AGL65 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42896 AGL16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01864 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g36418 No alias MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09567 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33045 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61246 AGL21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000222 AGL33 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g48749 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50341 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo121275 AGL7, AP1 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Solyc01g080785.1.1 AGL61, DIA,... transcription factor (MADS/AGL) 0.06 OrthoFinder output from all 47 species
Solyc01g106710.1.1 AGL62, Solyc01g106710 component MED19 of head module of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Solyc02g065730.2.1 AGL8, FUL, Solyc02g065730 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc02g089210.4.1 AGL7, AP1, Solyc02g089210 transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Solyc06g064840.4.1 STK, AGL11,... no description available(sp|f6i457|ag11c_vitvi : 172.0) 0.03 OrthoFinder output from all 47 species
Solyc10g080030.2.1 AGL18, Solyc10g080030 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc11g069770.2.1 AGL29, Solyc11g069770 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Spa_g02544 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28690 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31312 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000846_P003 AGL4, SEP2,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e003667_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e006950_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e010125_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e013738_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e031267_P003 SHP2, AGL5,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e033144_P001 AGL29, Zm00001e033144 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e034629_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e038716_P004 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e039774_P001 SHP2, AGL5,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 177 224
IPR002487 TF_Kbox 251 336
No external refs found!