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  5. Azfi_s0003.g007570

Azfi_s0003.g007570 (MCM3)


Aliases : MCM3

Description : component *(MCM3) of MCM replicative DNA helicase complex & original description: CDS=170-2572


Gene families : OG0007520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007570
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00257050 MCM3,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder output from all 47 species
Ala_g23792 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Als_g15677 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aop_g08357 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene37397.t1 MCM3, Aspi01Gene37397 component *(MCM3) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene37397.t2 MCM3, Aspi01Gene37397 component *(MCM3) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Ceric.33G060500.1 MCM3, Ceric.33G060500 component *(MCM3) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Cre06.g295700 MCM3 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.09 OrthoFinder output from all 47 species
Dac_g11573 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Dcu_g04031 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
GSVIVT01021426001 MCM3 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.12 OrthoFinder output from all 47 species
Gb_01563 MCM3 component MCM3 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
LOC_Os05g39850.1 MCM3, LOC_Os05g39850 component MCM3 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Len_g00730 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Lfl_g27704 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
MA_138102g0010 MCM3 component MCM3 of MCM replicative DNA helicase complex 0.11 OrthoFinder output from all 47 species
MA_163650g0010 MCM3 component MCM3 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Mp1g17650.1 MCM3 component MCM3 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Msp_g08861 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Nbi_g12401 MCM3 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g45821 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015488 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Sam_g16296 No alias component *(MCM3) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Solyc02g070780.4.1 MCM3, Solyc02g070780 component MCM3 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
Spa_g08773 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Tin_g10027 MCM3 component *(MCM3) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Zm00001e031913_P001 MCM3, Zm00001e031913 component MCM3 of MCM replicative DNA helicase complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0032508 DNA duplex unwinding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 110 240
IPR001208 MCM_dom 277 500
IPR041562 MCM_lid 557 641
IPR027925 MCM_N 12 99
No external refs found!