Description : MRM2-type rRNA methyltransferase & original description: CDS=40-2544
Gene families : OG0004018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004018_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0003.g007467 | |
Cluster | HCCA: Cluster_71 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00011p00229900 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AT4G25730 | No alias | FtsJ-like methyltransferase family protein | 0.09 | OrthoFinder output from all 47 species | |
Ceric.33G005200.1 | Ceric.33G005200 | MRM2-type rRNA methyltransferase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g529500 | No alias | No description available | 0.13 | OrthoFinder output from all 47 species | |
GSVIVT01023801001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g49230.1 | LOC_Os05g49230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_10429557g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_158214g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp8g14990.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Smo404107 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g020810.2.1 | Solyc11g020810 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e026556_P001 | Zm00001e026556 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e032456_P001 | Zm00001e032456 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
BP | GO:0032259 | methylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0008837 | diaminopimelate epimerase activity | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | HCCA |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
MF | GO:0047661 | amino-acid racemase activity | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |