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  5. Azfi_s0003.g007415

Azfi_s0003.g007415 (ATXYN1, RXF12)


Aliases : ATXYN1, RXF12

Description : endo-beta-1,4-xylanase & original description: CDS=41-2794


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007415
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037825001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g10440.1 LOC_Os03g10440 no description available(sp|a0a1p8b8f8|xyn5_arath : 380.0) 0.03 OrthoFinder output from all 47 species
Smo111304 ATXYN1, RXF12 Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
Zm00001e001013_P003 Zm00001e001013 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001000 GH10_dom 579 840
IPR003305 CenC_carb-bd 214 344
IPR003305 CenC_carb-bd 378 520
IPR003305 CenC_carb-bd 34 170
No external refs found!