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  5. Ehy_g02568

Ehy_g02568


Description : substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g02568

Target Alias Description ECC score Gene Family Method Actions
AT1G55270 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g02525 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g09527 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
GSVIVT01025417001 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g07160.1 LOC_Os03g07160 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species
Lfl_g38592 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g12112 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g01249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13401 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g07379 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc01g022740.3.1 Solyc01g022740 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 76 113
IPR006652 Kelch_1 211 258
IPR006652 Kelch_1 168 208
No external refs found!