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  5. Azfi_s0002.g001490

Azfi_s0002.g001490


Description : ribosome docking factor *(MDM38) & original description: CDS=252-2876


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001490
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00145760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001286.3 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g09912 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007694_P001 Zm00001e007694 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026946_P001 Zm00001e026946 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043022 ribosome binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR033122 LETM1-like_RBD 385 523
IPR033122 LETM1-like_RBD 337 376
No external refs found!