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  5. Azfi_s0002.g001295

Azfi_s0002.g001295


Description : Trihelix-type transcription factor & original description: CDS=1-1212


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001295
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT4G17060 FIP2 FRIGIDA interacting protein 2 0.03 OrthoFinder output from all 47 species
Adi_g059709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113706 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01326 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17678 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003683001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Nbi_g30006 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04985 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 89 185
No external refs found!