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  5. Azfi_s0002.g001076

Azfi_s0002.g001076


Description : subunit alpha of co-translational insertion system Sec61 subcomplex & original description: CDS=375-1808


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001076
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000836.9 No alias Protein translocation.endoplasmic... 0.02 OrthoFinder output from all 47 species
LOC_Os09g17830.1 LOC_Os09g17830 subunit alpha of co-translational insertion system Sec61... 0.05 OrthoFinder output from all 47 species
Smo180018 No alias Protein translocation.endoplasmic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 42 76
IPR002208 SecY/SEC61-alpha 77 460
No external refs found!