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  5. Azfi_s0001.g000759

Azfi_s0001.g000759


Description : not classified & original description: CDS=1-276


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000759
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00134660 evm_27.TU.AmTr_v1... Chitinase 10 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.02 OrthoFinder output from all 47 species
AT2G43580 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.02 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65471.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.06 OrthoFinder output from all 47 species
Dde_g18506 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038111001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_07465 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39700.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp2g24440.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Mp4g01780.1 HCHIB, B-CHI,... Endochitinase CH5B OS=Phaseolus vulgaris... 0.05 OrthoFinder output from all 47 species
Mp4g20450.1 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.03 OrthoFinder output from all 47 species
Mp4g20470.1 HCHIB, B-CHI,... Basic endochitinase B OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
CC GO:0009360 DNA polymerase III complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031554 regulation of termination of DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!