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  5. Azfi_s0001.g000499

Azfi_s0001.g000499


Description : beta-type-5 component *(PBE) of 26S proteasome & original description: CDS=206-1036


Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000499

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00083100 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
AT1G13060 PBE1 20S proteasome beta subunit E1 0.03 OrthoFinder output from all 47 species
Adi_g022653 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g09083 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ala_g01174 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00419 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
GSVIVT01010375001 No alias Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
LOC_Os06g06030.1 LOC_Os06g06030 component beta type-5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Lfl_g12238 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
MA_2177g0010 PBE1 component beta type-5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp2g06230.1 No alias component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Msp_g07676 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc05g056160.3.1 Solyc05g056160 component beta type-5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Spa_g02376 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Spa_g05432 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Tin_g02565 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 59 239
No external refs found!