Azfi_s0001.g000052 (RPL10B)

Aliases : RPL10B

Description : component *(uL16) of large ribosomal-subunit (LSU) proteome & original description: CDS=238-765

Gene families : OG0001847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001847_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0001.g000052
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00080890	RPL10B,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder output from all 47 species
AMTR_s00077p00151750	RPL10B,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
AT1G14320	SAC52, RPL10, RPL10A	Ribosomal protein L16p/L10e family protein	0.19	OrthoFinder output from all 47 species
Adi_g019250	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Aev_g35365	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g26652	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g04834	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g01654	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.10G071500.1	RPL10B, Ceric.10G071500	component *(uL16) of large ribosomal-subunit (LSU)...	0.21	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001424.5	RPL10C, SAG24	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	OrthoFinder output from all 47 species
Dde_g49972	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01001137001	RPL10B	60S ribosomal protein L10 OS=Vitis riparia	0.12	OrthoFinder output from all 47 species
GSVIVT01024537001	RPL10B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
Gb_06067	RPL10B	component RPL10 of LSU proteome component	0.14	OrthoFinder output from all 47 species
LOC_Os11g11390.1	RPL10B, LOC_Os11g11390	component RPL10 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Len_g44753	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g07261	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_17326g0010	SAC52, RPL10, RPL10A	component RPL10 of LSU proteome component	0.17	OrthoFinder output from all 47 species
Mp4g23990.1	RPL10B	component RPL10 of LSU proteome component	0.26	OrthoFinder output from all 47 species
Msp_g21522	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g34193	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ore_g19852	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g10010	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g32123	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pp3c11_4130V3.1	RPL10B, Pp3c11_4130	Ribosomal protein L16p/L10e family protein	0.08	OrthoFinder output from all 47 species
Pp3c2_29600V3.1	RPL10B, Pp3c2_29600	Ribosomal protein L16p/L10e family protein	0.14	OrthoFinder output from all 47 species
Pp3c7_22400V3.1	RPL10B, Pp3c7_22400	Ribosomal protein L16p/L10e family protein	0.07	OrthoFinder output from all 47 species
Ppi_g26211	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g62311	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g08903	No alias	component *(uL16) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g47361	No alias	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo437527	RPL10B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Solyc06g007520.4.1	RPL10B, Solyc06g007520	component RPL10 of LSU proteome component	0.24	OrthoFinder output from all 47 species
Solyc06g082650.4.1	SAC52, RPL10,...	component RPL10 of LSU proteome component	0.27	OrthoFinder output from all 47 species
Solyc06g082670.3.1	RPL10B, Solyc06g082670	component RPL10 of LSU proteome component	0.21	OrthoFinder output from all 47 species
Spa_g51059	RPL10C, SAG24	component *(uL16) of large ribosomal-subunit (LSU)...	0.16	OrthoFinder output from all 47 species
Zm00001e004933_P001	RPL10B, Zm00001e004933	component RPL10 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Zm00001e012474_P002	RPL10C, SAG24,...	component RPL10 of LSU proteome component	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0030150	protein import into mitochondrial matrix	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016180	Ribosomal_L10e/L16	64	119

External Links

No external refs found!

Azfi_s0001.g000052 (RPL10B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation