Ceric.39G021800.1 (PAT1, Ceric.39G021800)


Aliases : PAT1, Ceric.39G021800

Description : GRAS-type transcription factor & original description: pacid=50583628 polypeptide=Ceric.39G021800.1.p locus=Ceric.39G021800 ID=Ceric.39G021800.1.v2.1 annot-version=v2.1


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G021800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00161000 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Aev_g06696 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37460 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36559.t1 PAT1, Aspi01Gene36559 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030047001 PAT1 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01037777001 PAT1 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Gb_02264 PAT1 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36170.2 PAT1, LOC_Os07g36170 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39470.1 PAT1, LOC_Os07g39470 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Len_g07212 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14339 PAT1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28608 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22131 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15692 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37437 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11761 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g054170.4.1 SCL13, Solyc05g054170 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc07g065270.1.1 PAT1, Solyc07g065270 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc12g005340.3.1 PAT1, Solyc12g005340 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 248 613
No external refs found!