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  5. Ceric.39G013000.1

Ceric.39G013000.1 (Ceric.39G013000)


Aliases : Ceric.39G013000

Description : not classified & original description: pacid=50583026 polypeptide=Ceric.39G013000.1.p locus=Ceric.39G013000 ID=Ceric.39G013000.1.v2.1 annot-version=v2.1


Gene families : OG0010123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G013000.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g33283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27004 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009691 No alias not classified & original description: CDS=89-2044 0.05 OrthoFinder output from all 47 species
Cba_g05697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03852 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g30114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 337 384
IPR002885 Pentatricopeptide_repeat 412 436
IPR002885 Pentatricopeptide_repeat 513 533
IPR002885 Pentatricopeptide_repeat 237 264
IPR002885 Pentatricopeptide_repeat 541 569
No external refs found!