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  5. Ceric.39G004100.1

Ceric.39G004100.1 (Ceric.39G004100)


Aliases : Ceric.39G004100

Description : component *(NDC80) of NDC80 outer kinetochore complex & original description: pacid=50583575 polypeptide=Ceric.39G004100.1.p locus=Ceric.39G004100 ID=Ceric.39G004100.1.v2.1 annot-version=v2.1


Gene families : OG0005714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G004100.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.04 OrthoFinder output from all 47 species
Aev_g22488 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Als_g05052 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.09 OrthoFinder output from all 47 species
Aop_g08964 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021621.13 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Dcu_g10017 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.15 OrthoFinder output from all 47 species
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.1 OrthoFinder output from all 47 species
Mp2g14660.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.06 OrthoFinder output from all 47 species
Msp_g07559 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.12 OrthoFinder output from all 47 species
Nbi_g11443 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.09 OrthoFinder output from all 47 species
Solyc01g104520.3.1 Solyc01g104520 component NDC80 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species
Solyc01g104570.4.1 Solyc01g104570 component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
Tin_g04628 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 34 155
No external refs found!