Ceric.38G057600.1 (Ceric.38G057600)

Aliases : Ceric.38G057600

Description : not classified & original description: pacid=50579815 polypeptide=Ceric.38G057600.1.p locus=Ceric.38G057600 ID=Ceric.38G057600.1.v2.1 annot-version=v2.1

Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.38G057600.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
ATCG00830	RPL2.1	ribosomal protein L2	0.18	OrthoFinder output from all 47 species
ATCG01310	RPL2.2	ribosomal protein L2	0.18	OrthoFinder output from all 47 species
Aev_g14432	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.17	OrthoFinder output from all 47 species
Aev_g24286	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Ala_g18429	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Ala_g38158	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Als_g02244	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Als_g02447	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aob_g13898	RPL2.1	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g61267	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Cba_g03784	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Cba_g04596	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Ceric.23G029300.1	Ceric.23G029300	not classified & original description: pacid=50611505...	0.04	OrthoFinder output from all 47 species
Ceric.38G009500.1	RPL2.1, Ceric.38G009500	not classified & original description: pacid=50580350...	0.18	OrthoFinder output from all 47 species
Cre07.g348850	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Chara vulgaris	0.04	OrthoFinder output from all 47 species
Dcu_g49833	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dde_g21793	RPL2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Gb_17475	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.07	OrthoFinder output from all 47 species
Gb_20139	RPL2.1	component psRPS11 of small ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Gb_24024	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.07	OrthoFinder output from all 47 species
Gb_25047	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.07	OrthoFinder output from all 47 species
Gb_37512	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.05	OrthoFinder output from all 47 species
Lfl_g13189	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Lfl_g32423	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
MA_7814449g0010	No alias	60S ribosomal protein L2, mitochondrial OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Mp1g19370.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Nbi_g04996	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Nbi_g39693	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Ore_g43250	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Pir_g37334	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Pp3c2_23491V3.1	Pp3c2_23491	Ribosomal protein L2 family	0.02	OrthoFinder output from all 47 species
Smo137825	RPL2.1	Protein biosynthesis.organelle translation...	0.09	OrthoFinder output from all 47 species
Solyc00g500047.1.1	RPL2.1, Solyc00g500047	50S ribosomal protein L2, chloroplastic OS=Solanum...	0.03	OrthoFinder output from all 47 species
Solyc00g500152.1.1	RPL2.1, Solyc00g500152	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Solyc09g050067.1.1	RPL2.1, Solyc09g050067	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Zm00001e042445_P001	RPL2.1, Zm00001e042445	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species
Zm00001e042446_P001	RPL2.1, Zm00001e042446	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	67	137

External Links

No external refs found!

Ceric.38G057600.1 (Ceric.38G057600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation