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  5. Ceric.37G019900.1

Ceric.37G019900.1 (ERMO2, SEC24A, Ceric.37G019900)


Aliases : ERMO2, SEC24A, Ceric.37G019900

Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: pacid=50616518 polypeptide=Ceric.37G019900.1.p locus=Ceric.37G019900 ID=Ceric.37G019900.1.v2.1 annot-version=v2.1


Gene families : OG0002578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.37G019900.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00045940 ERMO2, SEC24A,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
AT3G07100 ERMO2, SEC24A Sec23/Sec24 protein transport family protein 0.05 OrthoFinder output from all 47 species
Adi_g014897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g104712 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aev_g07323 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Ala_g07463 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aop_g09723 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015967 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cba_g27013 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cre02.g091150 ERMO2, SEC24A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g06981 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Dcu_g09947 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Dcu_g41600 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Dde_g10689 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
GSVIVT01014261001 ERMO2, SEC24A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
Gb_11357 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Gb_26869 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.07 OrthoFinder output from all 47 species
LOC_Os04g04020.1 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Lfl_g03448 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
MA_10430919g0010 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
MA_10434705g0010 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Mp7g13560.1 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Msp_g47860 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ore_g05015 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Sam_g16600 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Sam_g18078 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Solyc02g082220.3.1 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Tin_g40335 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Zm00001e008766_P001 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e040573_P001 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 813 896
IPR006895 Znf_Sec23_Sec24 496 534
IPR006900 Sec23/24_helical_dom 908 1012
IPR006896 Sec23/24_trunk_dom 571 807
No external refs found!