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  5. Ceric.36G025700.1

Ceric.36G025700.1 (PSRP4, Ceric.36G025700)


Aliases : PSRP4, Ceric.36G025700

Description : component *(bTHXc) of small plastid ribosomal-subunit proteome & original description: pacid=50567893 polypeptide=Ceric.36G025700.1.p locus=Ceric.36G025700 ID=Ceric.36G025700.1.v2.1 annot-version=v2.1


Gene families : OG0003575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.36G025700.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G38140 PSRP4 plastid-specific ribosomal protein 4 0.19 OrthoFinder output from all 47 species
Aev_g09530 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g00113 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g33915 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g07535 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g00094 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cba_g05525 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dac_g00361 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g30276 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
LOC_Os05g09400.1 PSRP4, LOC_Os05g09400 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Len_g02488 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Lfl_g05135 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
MA_202598g0010 PSRP4 component psPSRP4 of small ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Mp1g04130.1 PSRP4 component psPSRP4 of small ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
Msp_g01793 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g00050 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g25773 No alias component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g47706 No alias component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc05g052710.3.1 PSRP4, Solyc05g052710 component psPSRP4 of small ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Spa_g22458 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Spa_g46754 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Zm00001e018923_P004 PSRP4, Zm00001e018923 component psPSRP4 of small ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR030826 Ribo_THX 47 136
No external refs found!