1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.35G044600.1

Ceric.35G044600.1 (Ceric.35G044600)


Aliases : Ceric.35G044600

Description : component *(SRm160) of RNA quality control Exon Junction complex & original description: pacid=50581673 polypeptide=Ceric.35G044600.1.p locus=Ceric.35G044600 ID=Ceric.35G044600.1.v2.1 annot-version=v2.1


Gene families : OG0003504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003504_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.35G044600.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Adi_g019655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07320 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aop_g11891 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61525.t1 Aspi01Gene61525 component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dac_g18749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024906001 No alias RNA processing.RNA quality control Exon Junction complex... 0.05 OrthoFinder output from all 47 species
Gb_33063 No alias component SRm160 of RNA quality control Exon Junction complex 0.04 OrthoFinder output from all 47 species
Lfl_g10938 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
MA_1065g0010 No alias component SRm160 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Mp8g09170.1 No alias component SRm160 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Pir_g26508 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Pir_g54700 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Solyc09g030390.3.1 Solyc09g030390 component SRm160 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Zm00001e001194_P001 Zm00001e001194 component SRm160 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR002483 PWI_dom 46 115
No external refs found!