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  5. Ceric.35G009000.1

Ceric.35G009000.1 (NPSN13, ATNPSN13,...)


Aliases : NPSN13, ATNPSN13, Ceric.35G009000

Description : Qb-type NPSN-group component of SNARE membrane fusion complex & original description: pacid=50581464 polypeptide=Ceric.35G009000.1.p locus=Ceric.35G009000 ID=Ceric.35G009000.1.v2.1 annot-version=v2.1


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.35G009000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00113150 NSPN11,... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AT1G48240 NPSN12, ATNPSN12 novel plant snare 12 0.05 OrthoFinder output from all 47 species
AT2G35190 NSPN11, ATNPSN11, NPSN11 novel plant snare 11 0.03 OrthoFinder output from all 47 species
Adi_g108234 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aev_g17807 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aev_g24174 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ala_g03833 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dac_g05588 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g07332 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os06g50120.1 NSPN11,... Qb-SNARE component NPSN11 of SNARE cell-plate vesicle... 0.05 OrthoFinder output from all 47 species
LOC_Os07g44350.1 NPSN13,... NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Len_g13457 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
MA_102436g0010 NPSN12, ATNPSN12 NPSN group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species
MA_3880g0010 NPSN13, ATNPSN13 NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Mp2g03810.1 NPSN13, ATNPSN13 NPSN group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species
Zm00001e035664_P001 NPSN13,... NPSN group Qb-type SNARE protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR005606 Sec20 183 260
No external refs found!